منابع مشابه
Cytoscape App Store
SUMMARY Cytoscape is an open source software tool for biological network visualization and analysis, which can be extended with independently developed apps. We launched the Cytoscape App Store to highlight the important features that apps add to Cytoscape, enable researchers to find and install apps they need and help developers promote their apps. AVAILABILITY The App Store is available at ...
متن کاملThe Cytoscape app article collection
As a network visualization and analysis platform, Cytoscape relies on apps to provide domain-specific features and functions. There are many resources available to support Cytoscape app development and distribution, including the Cytoscape App Store and an online "cookbook" for app developers. This article collection is another resource to help researchers find out more about relevant Cytoscape...
متن کاملWikiPathways App for Cytoscape: Making biological pathways
In this paper we present the open-source WikiPathways app for Cytoscape ( ) that can be used to import http://apps.cytoscape.org/apps/wikipathways biological pathways for data visualization and network analysis. WikiPathways is an open, collaborative biological pathway database that provides fully annotated pathway diagrams for manual download or through web services. The WikiPathways app allow...
متن کاملNetMatchStar: an enhanced Cytoscape network querying app
We present NetMatchStar, a Cytoscape app to find all the occurrences of a query graph in a network and check for its significance as a motif with respect to seven different random models. The query can be uploaded or built from scratch using Cytoscape facilities. The app significantly enhances the previous NetMatch in style, performance and functionality. Notably NetMatchStar allows queries wit...
متن کاملenhancedGraphics: a Cytoscape app for enhanced node
enhancedGraphics ( ) is a http://apps.cytoscape.org/apps/enhancedGraphics Cytoscape app that implements a series of enhanced charts and graphics that may be added to Cytoscape nodes. It enables users and other app developers to create pie, line, bar, and circle plots that are driven by columns in the Cytoscape Node Table. Charts are drawn using vector graphics to allow full-resolution scaling. ...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2013
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btt138